Wrapper function for calculating the species level predictions
Usage
species_predict(
species,
veg = NULL,
soil = NULL,
climate = NULL,
modified = FALSE,
boot = 0
)Arguments
- species
Unique Species ID.
- veg
Matrix of standardized vegetation information (row sum equals 1). If NULL and model is available, no prediction is generated.
- soil
Matrix of standardized soil information (row sum equals 1). If NULL and model is available, no prediction is generated.
- climate
Matrix of the bioclimatic variables that is matched to the vegetation and/or soil matrices.
- modified
Logical; Default behaviour (FALSE) means the original species coefficients are used. TRUE indicators the function should use the coefficients created through the coefficient_adjustment function.
- boot
Defines bootstrap iteration to generate the predictions from. If 0, uses the median bootstrap run unique for each species.